Tag: target/galaxy

105 notes

Frequently co-occurs with

NameTypeStatusRevisedRev
Planemo test report (JSON) schema draft 2026-05-11 1
CWL pickValue → Galaxy pick_value (post galaxy#22222) research draft 2026-05-11 1
CWL when:/pickValue → Galaxy branching translation research draft 2026-05-11 1
Galaxy paired_or_unpaired collection type research draft 2026-05-11 1
Planemo Asserts Idioms research draft 2026-05-11 6
Planemo workflow-test architecture research draft 2026-05-11 3
convert-nfcore-module-to-galaxy-tool mold draft 2026-05-11 2
implement-galaxy-workflow-test mold draft 2026-05-11 6
NEXTFLOW → GALAXY pipeline draft 2026-05-10 3
nf-core stub: block → Galaxy (intentional drop) pattern draft 2026-05-10 2
nf-core meta-map → Galaxy params pattern draft 2026-05-10 2
nf-core task.ext.args → Galaxy additional-options bag pattern draft 2026-05-10 2
nf-core channel input → Galaxy data / collection pattern draft 2026-05-10 2
nf-core versions emit → Galaxy <version_command> pattern draft 2026-05-10 2
Galaxy <discover_datasets> research draft 2026-05-10 1
Galaxy workflow draft format research draft 2026-05-10 2
Nextflow to Galaxy reference-data mapping research draft 2026-05-10 5
cwl-summary-to-galaxy-interface mold draft 2026-05-10 2
cwl-summary-to-galaxy-data-flow mold draft 2026-05-10 2
cwl-summary-to-galaxy-template mold draft 2026-05-10 3
nextflow-summary-to-galaxy-data-flow mold draft 2026-05-10 4
nextflow-summary-to-galaxy-interface mold draft 2026-05-10 4
nextflow-summary-to-galaxy-reference-data mold draft 2026-05-10 3
nextflow-summary-to-galaxy-template mold draft 2026-05-10 6
paper-summary-to-galaxy-template mold draft 2026-05-10 3
Nextflow conditional to Galaxy subworkflow / when research draft 2026-05-08 1
Nextflow params to Galaxy workflow inputs research draft 2026-05-08 4
author-galaxy-tool-wrapper mold draft 2026-05-08 3
discover-shed-tool mold draft 2026-05-07 4
Galaxy datatypes registry sample research draft 2026-05-06 2
Galaxy sample_sheet collection types research draft 2026-05-06 2
Galaxy Workflow Testability Design research draft 2026-05-06 2
gxformat2 structural JSON Schema research draft 2026-05-06 2
gxformat2 workflow inputs research draft 2026-05-06 2
Nextflow path/glob to Galaxy datatype mapping research draft 2026-05-06 1
Nextflow-to-Galaxy channel shape mapping research draft 2026-05-06 2
nf-schema sample sheet validation gaps in Galaxy research draft 2026-05-06 1
compare-against-iwc-exemplar mold draft 2026-05-06 6
Galaxy tool summary manifest schema draft 2026-05-05 1
Galaxy ParsedTool schema draft 2026-05-05 1
Galaxy workflow test format schema draft 2026-05-05 4
Component Nextflow Containers And Envs research draft 2026-05-05 3
Galaxy collection semantics research draft 2026-05-05 3
Galaxy native workflow (.ga) structural JSON Schema research draft 2026-05-05 1
Galaxy tool XML schema research draft 2026-05-05 1
Nextflow nf-test snapshots to Galaxy/Planemo assertions research draft 2026-05-05 2
implement-galaxy-tool-step mold draft 2026-05-05 5
paper-summary-to-galaxy-design mold draft 2026-05-05 1
summarize-galaxy-tool mold draft 2026-05-05 5
Cleanup, sync, and publish non-empty results pattern draft 2026-05-04 1
Fan-in bundle, consume, and flatten pattern draft 2026-05-04 1
Manifest to mapped collection lifecycle pattern draft 2026-05-04 1
Reshape, relabel, and remap by collection axis pattern draft 2026-05-04 1
Galaxy tool discovery recommendation schema draft 2026-05-04 1
Iwc Runtime Parameter Shims Survey research draft 2026-05-04 1
Nextflow: branch, filter, and ifEmpty to Galaxy filters and gates source-pattern draft 2026-05-04 1
Nextflow: grouped channel to regrouped Galaxy collection source-pattern draft 2026-05-04 1
Nextflow: keyed join/combine(by:) to identifier-synchronized map-over source-pattern draft 2026-05-04 1
Nextflow: mapped output cleanup and publishing source-pattern draft 2026-05-04 1
Nextflow: mix and collect to report aggregation source-pattern draft 2026-05-04 1
Nextflow: samplesheet rows to Galaxy collections source-pattern draft 2026-05-04 1
Parameter: compose runtime text parameter pattern draft 2026-05-03 3
Conditional: gate on non-empty result pattern draft 2026-05-03 3
Conditional: route between alternative outputs pattern draft 2026-05-03 3
Conditional: transform or pass through pattern draft 2026-05-03 2
Parameter: derive from file pattern draft 2026-05-03 3
Conditional: run optional step pattern draft 2026-05-03 4
Parameter: map workflow enum to tool parameter pattern draft 2026-05-03 3
Tabular: compute a new column pattern draft 2026-05-03 3
Tabular: concatenate collection to table pattern draft 2026-05-03 2
Tabular: cut and reorder columns pattern draft 2026-05-03 2
Tabular: filter rows by regex pattern draft 2026-05-03 2
Tabular: filter rows by column value pattern draft 2026-05-03 2
Tabular: group and aggregate pattern draft 2026-05-03 2
Tabular: join on key pattern draft 2026-05-03 2
Tabular: pivot collection to wide pattern draft 2026-05-03 2
Tabular: prepend header pattern draft 2026-05-03 2
Tabular: relabel by row counter pattern draft 2026-05-03 2
Tabular: SQL query pattern draft 2026-05-03 2
Tabular: synthesize BED from 3-column input pattern draft 2026-05-03 2
Tabular: split taxonomy string pattern draft 2026-05-03 2
Galaxy data-flow draft contract research draft 2026-05-03 2
Galaxy tool summary input source research draft 2026-05-03 2
Iwc Map Over Lifecycle Survey research draft 2026-05-03 1
Iwc Shortcuts Anti Patterns research draft 2026-05-03 2
Iwc Test Data Conventions research draft 2026-05-03 3
Iwc Workflow Testability Survey research draft 2026-05-03 2
validate-galaxy-workflow mold draft 2026-05-03 3
Nextflow: source pattern map source-pattern draft 2026-05-03 1
Galaxy: collection patterns pattern draft 2026-05-02 1
Galaxy: conditionals patterns pattern draft 2026-05-02 1
Galaxy: tabular patterns pattern draft 2026-05-02 1
Galaxy Apply Rules DSL research draft 2026-05-02 2
Galaxy collection-operation tools research draft 2026-05-02 2
Galaxy tool and job failure reference research draft 2026-05-02 1
Galaxy workflow invocation failure reference research draft 2026-05-02 1
Iwc Conditionals Survey research draft 2026-05-02 2
Iwc Parameter Derivation Survey research draft 2026-05-02 1
Iwc Tabular Operations Survey research draft 2026-05-02 2
Iwc Transformations Survey research draft 2026-05-02 2
Nextflow operators to Galaxy collection recipes research draft 2026-05-02 1
debug-galaxy-workflow-output mold draft 2026-05-02 3
validate-galaxy-step mold draft 2026-05-02 2
CWL → GALAXY pipeline draft 2026-04-30 2
PAPER → GALAXY pipeline draft 2026-04-30 2