Sources
Papers
A Paper note is our review of someone else's work. It links to the source and says what the work claims, what it establishes, and where it stops — it is not a copy of the source, and it is not scholarship we authored.
- Mapper Survival Analysis on TCGA-BRCA Mapper risk tiers on breast-cancer expression that survive a held-out split, beside a discordant-survivor result defined by the outcome it predicts. method/mapperapplication/clinical-outcomemodality/high-dim-tabular
- Persistent Spectral Graph The founding persistent-Laplacian paper: harmonic spectra recover persistent homology exactly, and non-harmonic spectra carry the geometry it discards. method/persistent-laplacianmethod/persistent-homologyapplication/molecular-sciencesmodality/point-cloudmodality/molecular-structure
- TDA and TDL Beyond Persistent Homology Su and colleagues' map of the topological methods that extend past persistent homology, and what each one recovers. method/persistent-homologymethod/persistent-laplacianmethod/topological-deep-learning
- TDA and TDL in Molecular Sciences Wee and Jiang's account of how molecular problems pushed topology from description to conditioned, learnable representations. method/persistent-homologymethod/persistent-laplacianmethod/topological-deep-learningapplication/molecular-sciencesmodality/molecular-structure
- TDL for Docking, Screening, and Drug-Target Interaction Suay-García and Falcó's evaluation playbook for topological drug discovery, prescriptive where this corpus's other surveys are descriptive. method/persistent-homologymethod/topological-deep-learningapplication/molecular-sciencesapplication/structure-qamodality/molecular-structure
- Weighted Hodge Laplacians Su, Tong and Wei swap the filtration for a weight function, and finally give the B-factor claim the 346-protein blind evaluation it always needed. method/spectral-geometryapplication/molecular-sciencesmodality/molecular-structure