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TDA Bioinformatics Foundry
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Papers

A Paper note is our review of someone else's work. It links to the source and says what the work claims, what it establishes, and where it stops — it is not a copy of the source, and it is not scholarship we authored.

  • Persistent Spectral Graph The founding persistent-Laplacian paper: harmonic spectra recover persistent homology exactly, and non-harmonic spectra carry the geometry it discards. method/persistent-laplacianmethod/persistent-homologyapplication/molecular-sciencesmodality/point-cloudmodality/molecular-structure
  • TDA and TDL Beyond Persistent Homology Su and colleagues' map of the topological methods that extend past persistent homology, and what each one recovers. method/persistent-homologymethod/persistent-laplacianmethod/topological-deep-learning
  • TDA and TDL in Molecular Sciences Wee and Jiang's account of how molecular problems pushed topology from description to conditioned, learnable representations. method/persistent-homologymethod/persistent-laplacianmethod/topological-deep-learningapplication/molecular-sciencesmodality/molecular-structure
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