Method
method/persistent-laplacian
Persistent topological Laplacian methods and implementations.
Method guide
Related notes
- open-topodockq-featurizer The open persistent-Laplacian featurizer that replaces TopoDockQ's bytecode-only one, built over our petls-pytorch fork. Recipe
- open-topodockq-featurizer The MIT clean-room reimplementation of TopoDockQ's interface featurizer, bit-exact against the bytecode it replaces. Environment
- open-topodockq-featurizer The MIT clean-room TopoDockQ interface featurizer, bit-exact against the bytecode-only original it replaces. Package
- Persistent Spectral Graph The founding persistent-Laplacian paper: harmonic spectra recover persistent homology exactly, and non-harmonic spectra carry the geometry it discards. Paper
- petls The reference persistent-topological-Laplacian library, built from source here and permanently stuck here, because upstream declares no licence at all. Recipe
- petls Upstream PETLS, the compiled persistent-topological-Laplacian library, kept as a local oracle rather than a shippable dependency. Environment
- PETLS A C++ library with Python bindings for building persistent topological Laplacians and computing their matrices and spectra. Package
- petls-pytorch The GPU-native PyTorch persistent-Laplacian engine, built from our fork rather than the PyPI release because the corpus depends on three fixes. Recipe
- petls-pytorch The Apache-2.0 pure-Python reimplementation of PETLS, and the redistributable persistent-Laplacian engine this corpus actually ships. Environment
- petls-pytorch An Apache-2.0 PyTorch implementation of persistent topological Laplacians and the Foundry's shippable PETLS substitute. Package
- TDA and TDL Beyond Persistent Homology Su and colleagues' map of the topological methods that extend past persistent homology, and what each one recovers. Paper
- TDA and TDL in Molecular Sciences Wee and Jiang's account of how molecular problems pushed topology from description to conditioned, learnable representations. Paper
- topodockq The TopoDockQ scorer run from a pinned git clone; MIT-licensed but built around a Python 3.8 bytecode core with no source. Environment
- TopoDockQ A persistent-Laplacian scorer predicting DockQ interface quality to rank and filter peptide-protein docking poses. Package