artifact
galaxy-workflow-draft
default filename(s): galaxy-workflow-draft.gxwf.yml
Producers (4)
- cwl-summary-to-galaxy-template yaml · galaxy-workflow-draft.gxwf.yml
gxformat2 draft (see [[galaxy-workflow-draft-format]]): topology fully resolved (workflow inputs, outputs, step set, edges); tool_id / tool_state / tool_shed_repository and wrapper-determined port names may be TODO with free-text _plan_state / _plan_context / _plan_in / _plan_out per step for later implementation Molds.
- implement-galaxy-tool-step yaml · galaxy-workflow-draft.gxwf.yml
gxformat2 skeleton with one more abstract step replaced by a concrete tool step (loop iteration output).
- nextflow-summary-to-galaxy-template yaml · galaxy-workflow-draft.gxwf.yml
gxformat2 draft (see [[galaxy-workflow-draft-format]]): topology fully resolved (workflow inputs, outputs, step set, edges); tool_id / tool_state / tool_shed_repository and wrapper-determined port names may be TODO with free-text _plan_state / _plan_context / _plan_in / _plan_out per step for later implementation Molds.
- paper-summary-to-galaxy-template yaml · galaxy-workflow-draft.gxwf.yml
gxformat2 draft (see [[galaxy-workflow-draft-format]]): topology fully resolved (workflow inputs, outputs, step set, edges); tool_id / tool_state / tool_shed_repository and wrapper-determined port names may be TODO with free-text _plan_state / _plan_context / _plan_in / _plan_out per step for later implementation Molds.
Consumers (2)
- implement-galaxy-tool-step
gxformat2 skeleton being filled in step by step; the step replaces a placeholder in this draft.
- implement-galaxy-workflow-test
gxformat2 workflow being tested; provides labels, outputs, and shapes the test must assert against.
Pipelines
- CWL → GALAXY produced @ phase 5, 8 · consumed @ phase 8, 11
- NEXTFLOW → GALAXY produced @ phase 6, 9 · consumed @ phase 9, 12
- PAPER → GALAXY produced @ phase 4, 7 · consumed @ phase 7, 10