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paper-summary-to-cwl-design

Translate a paper summary into a CWL workflow design brief.

Mold health

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  • Source layout

    Directory Mold with only index.md frontmatter.

  • Axis fields

    source-specific fields are coherent.

  • Eval plan

    eval.md not written yet.

  • Typed refs

    No typed references yet.

  • On-demand triggers

    All on-demand references describe triggers.

  • Evidence checks

    Hypothesis references include verification.

axis
source-specific
source
paper
name
paper-summary-to-cwl-design

Artifact handoffs

/ pipeline contract

Produces

  • paper-cwl-design markdown paper-cwl-design.md

    Combined CWL interface + data-flow design brief; a single reviewable handoff until paper examples justify a split.

Consumes

paper-summary-to-cwl-design

Read a paper summary and emit a reviewable Markdown CWL workflow design brief. Combine interface choices and abstract data-flow choices until paper examples justify a cleaner split.

The output is not a concrete CWL Workflow. summary-to-cwl-template turns this brief and the paper summary into a skeleton.

Incoming References (2)

  • summary-to-cwl-templaterelated note— CWL Workflow skeleton with per-step TODOs from source and design handoffs.
  • PAPER → CWLphase of pipeline— Direct path from a paper to a CWL Workflow + CommandLineTool set.