CWL
Working on implementing CWL in Galaxy.
CWL
Project tracking CWL implementation in Galaxy: conformance tests, conditionals, packing, tool loading.
Project Files
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workflow_features (13)
- COLLECTION_DEFAULTS
- CWL_CONDITIONALS_PICK_VALUE_FRAMEWORK_SUPPORT
- CWL_REPLACE_EPHEMERAL_COLLECTIONS_PLAN
- CWL_REPLACE_EPHEMERAL_COLLECTIONS_PLAN_V2
- FAILED_EPHEMERAL_COLLECTION_SWAP_1_LESSONS_LEARNED
- INDEX
- MISSING_CWL_MAP_REDUCE_FEATURES
- PLAN_GAP1_FLAT_CROSSPRODUCT
- PLAN_GAP2_NESTED_CROSSPRODUCT
- PLAN_GAP3_DOTPRODUCT_VALUEFROM
- PLAN_GAP4_SCATTER_INTO_SUBWORKFLOWS
- PLAN_GAP6_MERGE_NESTED
- PLAN_LOAD_CONTENTS
- CWL_CONDITIONALS_PICK_VALUE_COMPARE
- CWL_CONDITIONALS_PICK_VALUE_FRAMEWORK_SUPPORT
- CWL_CONDITIONALS_PICK_VALUE_VIA_TOOL_PLAN
- CWL_CONDITIONALS_STATUS
- CWL_GRAPH_RESEARCH_ANDPLAN
- CWL_LEGACY_BRANCH
- CWL_LEGACY_RUNTIME
- CWL_PROBLEMS_POST_PACKING_SWAP
- CWL_SCHEMA_DEF_REQUIREMENT
- CWL_TOOL_LOADING_AND_REFERENCE_TOOLS
- CWLTOOL_PACK_WORKAROUND
- DEBUGGING_CONFORMANCE_TESTS
- DEPENDENCIES_CWL_CONFORMANCE_TESTS
- DEPENDENCY_CWLTOOL
- DOCKER_REQUIRED_TESTING
- HDCA_AS_OBJECTS_PLAN
- JOB_INTERNAL_CWL_NULL_UNION
- PLAN_CWL_STDIN_REDIRECT
- PLAN_IWD_CONTAINER_ENTRYNAME
- PLAN_NETWORKACCESS_REQUIREMENT
- TOOL_LOADING_FROM_CONFORMANCE_TESTS_PLAN
- v1.2 Red and Optional
- WORKFLOW_OUTPUT_STEP_ORDER
- WORKFLOW_OUTPUT_STEP_ORDER_PLAN
- WORKFLOW_OUTPUT_STEP_ORDER_REVIEW
- WORKFLOW_SECONDARY_FILES